iBridge
==========

.. automodule:: iBridge
    :members: 
    :undoc-members: 
    :show-inheritance: 
    
    **iBridge running procedure**
    -------------------------

    **Note**:
    This project is to identify target reactions or metabolites that will enhance production of commercial chemicals through a metabolite-centric approach


    1. Clone the repository

    .. code-block::

            $ git clone https://github.com/kaistsystemsbiology/iBridge.git


    2. Change the directory

    .. code-block::
            $ cd ibridge


    3. Create and activate a virtual environment

    .. code-block::

            $ conda env create -f environment.yml
            $ conda activate ibridge


    4. Install the virtual environment kernel into the jupyter

      .. code-block::

            $ python -m ipykernel install —user —name ibridge —display-name "ibridge"

    
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